Verzija | Modul |
---|---|
1.8.1 | bioinfo/detonate/1.8.1 |
Korištenje
Primjer
#!/bin/bash #$ -N detonate-test #$ -cwd #$ -pe *mpisingle 8 module load bioinfo/detonate/1.8.1 rsem-eval-calculate-score examples/toy_SE.fq examples/toy_assembly_1.fa ./rsem_eval_1 76 --transcript-length-parameters true_transcript_length_distribution/mouse.txt -p $NSLOTS
Instalcija
- potreban modul Bowtie
- potreban modul Samtools
- Instalacija je izvršena prevodiocem intel/2019
wget https://github.com/deweylab/detonate/archive/refs/tags/1.8.1.tar.gz module load intel/2019 CC=icc CXX=icpc make