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Verzija	Modul
1.8.1	bioinfo/detonate/1.8.1

Korištenje

#!/bin/bash
#$ -N detonate-test
#$ -cwd
#$ -pe *mpisingle 8

module load bioinfo/detonate/1.8.1

rsem-eval-calculate-score examples/toy_SE.fq examples/toy_assembly_1.fa ./rsem_eval_1 76 --transcript-length-parameters true_transcript_length_distribution/mouse.txt -p $NSLOTS

Instalcija

potreban modul Bowtie
potreban modul Samtools
Instalacija je izvršena prevodiocem intel/2019

wget https://github.com/deweylab/detonate/archive/refs/tags/1.8.1.tar.gz
module load intel/2019
CC=icc CXX=icpc make