Dostupne verzije i pripadajući moduli
| Verzija | Modul |
|---|---|
| 3.0.2 | bioinfo/busco/3.0.2 |
| 5.4.3 | bioinfo/busco/5.4.3 |
| 5.4.4 | bioinfo/busco/5.4.4 |
Verzije 5.4.3 i 5.4.4 instalirane su conda odnosno mamba package managerom.
User manual (instalacija i korištenje): https://busco.ezlab.org/busco_userguide.html
Primjer korištenja (5.4.3):
busco_test.sge
#!/bin/bash
#$ -N busco_test
#$ -cwd
#$ -pe *mpisingle 5
module load bioinfo/busco/5.4.3
export input=<naziv_datoteke>
busco -i ${input} -l actinopterygii_odb10 -o ${JOB_ID} -m transcriptome -c $NSLOTS
Instalacija (5.4.3):
Mamba/Conda instalacija
source /apps/mambaforge/mamba/bin/activate mamba create -p /apps/virtenv/busco5.4.3 python=3.8 busco=5.4.3 -c bioconda conda activate /apps/virtenv/busco5.4.3