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Verzija | Modul | Supek | Padobran |
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2.3.0 | scientific/jellyfish/2.3.0 | | |
2.3.1 | scientific/jellyfish/2.3.0 | | ![(tick)](/s/l55c0r/9012/ly29vq/_/images/icons/emoticons/check.svg) |
Službena dokumentacija
fasta datoteka korištena za primjer: http://ftp.1000genomes.ebi.ac.uk/vol1/ftp/technical/reference/human_g1k_v37.fasta.gz
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Code Block |
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language | bash |
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title | Brojanje k-mera |
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|
#PBS -N k-mer_counting
#PBS -q cpu
#PBS -l select=1:ncpus=60
cd ${PBS_O_WORKDIR}
module load scientific/jellfyish/2.3.0
jellyfish count -m 21 -s 200M -t $NCPUS -C human_g1k_v37.fasta |
Code Block |
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language | bash |
---|
title | Brojanje k-mera(Padobran) |
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|
#PBS -N k-mer_counting
#PBS -q cpu
#PBS -l select=1:ncpus=60
cd ${PBS_O_WORKDIR}
module load scientific/jellfyish/2.3.0
jellyfish.sh jellyfish count -m 21 -s 200M -t $NCPUS -C human_g1k_v37.fasta |
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