Dostupne verzije i moduli
| Verzija | Modul |
|---|---|
| 0.2 | bioinfo/FaNDOM/0.2 |
Korištenje
- Primjer : https://github.com/jluebeck/FaNDOM
| Code Block | ||
|---|---|---|
| ||
#!/bin/bash #$ -N fndm #$ -cwd #$ -pe *mpisingle 10 module load bioinfo/FaNDOM/0.2 FaNDOM -t=$NSLOTS -r=test_data/reference.cmap -q=test_data/query.cmap -sname=test_data/res -outfmt=xmap |
- Korištenje python skripti
| Code Block | ||
|---|---|---|
| ||
#!/bin/bash #$ -N fndm-py #$ -cwd #$ -pe *mpisingle 2 module load bioinfo/FaNDOM/0.2 python $PYSCRIPTS/wrapper_contigs.py -f $PWD -t $NSLOTS -r test_data/reference.cmap -q test_data/query.cmap -n res -o $PWD/test_data -c 19 -m 1 |
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