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VerzijaModulSupekPadobran
2.3.0scientific/jellyfish/2.3.0(tick)  (error) 
2.3.1scientific/jellyfish/2.3.01(error) (tick)

Službena dokumentacija

fasta datoteka korištena za primjer: http://ftp.1000genomes.ebi.ac.uk/vol1/ftp/technical/reference/human_g1k_v37.fasta.gz

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Code Block
languagebash
titleBrojanje k-mera(Padobran)
#PBS -N k-mer_counting
#PBS -q cpu
#PBS -l select=1:ncpus=60

cd ${PBS_O_WORKDIR}

module load scientific/jellfyish/2.3.01

jellyfish.sh jellyfish count -m 21 -s 200M -t $NCPUS -C human_g1k_v37.fasta

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