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Primjer je preuzet sa: https://github.com/soedinglab/MMseqs2
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#!/bin/bash #PBS -q cpu #PBS -N mmseqs-test #PBS -l select=1:ncpus=16 cd $PBS_O_WORKDIR module load scientific/MMseqs2/14-7e284 mmseqs easy-search QUERY.fasta DB.fasta alnRes.m8 tmp --threads $NCPUS |
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- $NR
- $NT
- $swissprot
- $Uniref50
- $Uniref90
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#!/bin/bash #PBS -q cpu #PBS -N mmseqs-test-DB #PBS -l select1:ncpus16 cd $PBS_O_WORKDIR module load scientific/MMseqs2/14-7e284 mmseqs easy-search QUERY.fasta $NR alnRes.m8 tmp |
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