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  • $NR
  • $NT
  • $swissprot
  • $Uniref50
  • $Uniref90


Code Block
languagebash
titlemmseqs-easy search with DB
#!/bin/bash

#PBS -q cpu
#PBS -N mmseqs-test-DB
#PBS -l select1:ncpus16

cd $PBS_O_WORKDIR

module load scientific/MMseqs2/14-7e284

mmseqs easy-search QUERY.fasta $NR alnRes.m8 tmp

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