Verzija | Modul |
---|---|
1.2.4 | bioinfo/ClustalOmega/1.2.4 |
Primjeri su preuzeti s: http://www.clustal.org/omega/homfam-20110613-25.tar.gz
Program Clustal Omega zadano uzima sve dostupne procesore, stoga je potrebno ograničit sa opcijom --thread pri korištenju. |
#!/bin/bash #$ -N ClustalO-test #$ -cwd #$ -pe *mpisingle 8 module load bioinfo/ClustalOmega/1.2.4 clustalo -i bench/tms_test-only.vie -o tms_test-only.a2m -v --threads $NSLOTS |
Instalacija je provedena sa prevodiocem: intel/2020
Prije same instalacije instaliran je argtable-devel.x86-x64
wget https://github.com/GSLBiotech/clustal-omega/archive/refs/tags/1.2.4-cmake.tar.gz tar -xvf 1.2.4-cmake.tar.gz cd clustal-omega-1.2.4-cmake mkdir build module load intel/2020 export PATH=$PATH:/usr/include:/usr/lib64 #Putanje do potrebnih knjižnica za argtable2 ./configure CC=icc CXX=icpc --prefix=$HOME/clust/1.2.4-cmake/build make make install |