Verzija | Moduli |
---|---|
2.2.1 | bioinfo/HISAT2/2.2.1 |
Primjer 1:
#!/bin/bash $# -N HISAT2-indexing $# -pe *mpisingle 4 $# -cwd module load bioinfo/HISAT2/2.2.1 hisat2-build -p $NSLOTS reference/22_20-21M.fa --snp reference/22_20-21M.snp 22_20-21M_snp |
Primjer 2:
#!/bin/bash #$ -N HISAT2-align #$ -pe *mpisingle 4 $# -cwd module load bioinfo/HISAT2/2.2.1 hisat2 -f -x index/22_20-21M_snp -U reads/reads_1.fa -S eg1.sam |
git clone https://github.com/DaehwanKimLab/hisat2.git cd hisat2 make |